Import Public Genomes for Analysis

ggKbase analysis of public genomes (or genomes from collaborators) for which we don’t have reads and assembly files requires an altered import preparation. The genomes will be concatenated into a mock metagenome, run through the normal metagenome preparation pipeline, and separated back into the original genomes using a scaff2bin file after import. 1. Put scaffold…

Projects under the NCBI Rifle umbrella

At NCBI related BioProjects can be subsumed under a single umbrella project. For example, all  Rifle-related project are associated with the Rifle umbrella project  (BioProject ID PRJNA217089). For reference, here is a full list of project submissions under the Rifle umbrella: