Scaffold Extension and Gap Closing

A post by Lin-Xing Chen, Karthik Anantharaman, Alon Shaiber, A. Murat Eren, and Jillian F. Banfield. For any questions about the methods described below, please contact us via email (linxingchen@berkeley.edu). Introduction The purpose of this post is to describe step-by-step procedure for scaffold extension and gap closing to dramatically improve the quality of metagenome-assembled genomes…